Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17641.1 | AFY17776.1 | PputUW4_00433 | PputUW4_00568 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Lipoprotein. | 0.767 |
AFY17641.1 | AFY18349.1 | PputUW4_00433 | PputUW4_01142 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Virulence factor family protein. | 0.523 |
AFY17641.1 | AFY18604.1 | PputUW4_00433 | PputUW4_01398 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | CHAD domain protein. | 0.773 |
AFY17641.1 | AFY19165.1 | PputUW4_00433 | PputUW4_01961 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Hypothetical protein. | 0.769 |
AFY17641.1 | AFY19166.1 | PputUW4_00433 | PputUW4_01962 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Hypothetical protein. | 0.772 |
AFY17641.1 | AFY21679.1 | PputUW4_00433 | PputUW4_04487 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Hypothetical protein. | 0.458 |
AFY17641.1 | algX | PputUW4_00433 | PputUW4_04477 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Alginate biosynthesis protein AlgX. | 0.759 |
AFY17641.1 | fusC | PputUW4_00433 | PputUW4_04488 | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | Fusaric acid resistance protein; [S] COG1289 Predicted membrane protein. | 0.453 |
AFY17776.1 | AFY17641.1 | PputUW4_00568 | PputUW4_00433 | Lipoprotein. | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | 0.767 |
AFY17776.1 | AFY18349.1 | PputUW4_00568 | PputUW4_01142 | Lipoprotein. | Virulence factor family protein. | 0.620 |
AFY17776.1 | AFY18604.1 | PputUW4_00568 | PputUW4_01398 | Lipoprotein. | CHAD domain protein. | 0.757 |
AFY17776.1 | AFY19165.1 | PputUW4_00568 | PputUW4_01961 | Lipoprotein. | Hypothetical protein. | 0.714 |
AFY17776.1 | AFY19166.1 | PputUW4_00568 | PputUW4_01962 | Lipoprotein. | Hypothetical protein. | 0.747 |
AFY17776.1 | AFY21679.1 | PputUW4_00568 | PputUW4_04487 | Lipoprotein. | Hypothetical protein. | 0.447 |
AFY17776.1 | algX | PputUW4_00568 | PputUW4_04477 | Lipoprotein. | Alginate biosynthesis protein AlgX. | 0.692 |
AFY18349.1 | AFY17641.1 | PputUW4_01142 | PputUW4_00433 | Virulence factor family protein. | HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression. | 0.523 |
AFY18349.1 | AFY17776.1 | PputUW4_01142 | PputUW4_00568 | Virulence factor family protein. | Lipoprotein. | 0.620 |
AFY18349.1 | AFY18350.1 | PputUW4_01142 | PputUW4_01143 | Virulence factor family protein. | Transmembrane acid tolerance protein; [S] COG2898 Uncharacterized conserved protein. | 0.958 |
AFY18349.1 | AFY18604.1 | PputUW4_01142 | PputUW4_01398 | Virulence factor family protein. | CHAD domain protein. | 0.449 |
AFY18349.1 | AFY19165.1 | PputUW4_01142 | PputUW4_01961 | Virulence factor family protein. | Hypothetical protein. | 0.504 |
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