STRINGSTRING
AFY18364.1 AFY18364.1 AFY18363.1 AFY18363.1 AFY18362.1 AFY18362.1 AFY18360.1 AFY18360.1 hisQ hisQ hisM hisM hisP hisP AFY20195.1 AFY20195.1 hisJ hisJ AFY17399.1 AFY17399.1 AFY19860.1 AFY19860.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AFY18364.1[ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family. (260 aa)    
Predicted Functional Partners:
AFY18363.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 0.991
AFY18362.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
 
 0.981
AFY18360.1
[E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.976
hisQ
[E] COG0765 ABC-type amino acid transport system, permease component.
 0.959
hisM
[E] COG0765 ABC-type amino acid transport system, permease component.
 
 
 0.956
hisP
Histidine transport ATP-binding protein HisP; [E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.951
AFY20195.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
 0.919
hisJ
Periplasmic histidine-binding protein HisJ; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
  
 
0.906
AFY17399.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
 0.903
AFY19860.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
 0.861
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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