STRINGSTRING
pcaK pcaK pcaR pcaR catI catI pcaD1 pcaD1 pcaG pcaG benB benB pcaH pcaH benA benA catJ catJ pcaB1 pcaB1 xylL xylL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcaK4-hydroxybenzoate transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. (448 aa)    
Predicted Functional Partners:
pcaR
Pca regulon regulatory protein PcaR; [K] COG1414 Transcriptional regulator.
 
   
 0.665
catI
[I] COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
  
  
 0.612
pcaD1
3-oxoadipate enol-lactonase; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
   
 0.592
pcaG
[Q] COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
   
 0.588
benB
[Q] COG5517 Small subunit of phenylpropionate dioxygenase.
 
  
 0.556
pcaH
[Q] COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
   
 0.541
benA
Benzoate 1,2-dioxygenase large subunit; [PR] COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
 
   
 0.529
catJ
[I] COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
  
  
 0.528
pcaB1
3-carboxy-cis,cis-muconate cycloisomerase; [F] COG0015 Adenylosuccinate lyase.
 
   
 0.493
xylL
[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   
 0.476
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.