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pcaG pcaG pcaH pcaH pcaB1 pcaB1 pobA pobA pcaB2 pcaB2 pcaC1 pcaC1 catI catI pcaD1 pcaD1 catJ catJ AFY19929.1 AFY19929.1 pcaF pcaF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
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Textmining
[Homology]
Score
pcaG[Q] COG3485 Protocatechuate 3,4-dioxygenase beta subunit. (188 aa)    
Predicted Functional Partners:
pcaH
[Q] COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
0.998
pcaB1
3-carboxy-cis,cis-muconate cycloisomerase; [F] COG0015 Adenylosuccinate lyase.
 
 
 0.985
pobA
4-hydroxybenzoate 3-monooxygenase; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
  
 0.981
pcaB2
3-carboxy-cis,cis-muconate cycloisomerase; [F] COG0015 Adenylosuccinate lyase.
 
 
 0.959
pcaC1
4-carboxymuconolactone decarboxylase; [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
  
 0.901
catI
[I] COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 
  
 0.839
pcaD1
3-oxoadipate enol-lactonase; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
   
 0.831
catJ
[I] COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 
  
 0.823
AFY19929.1
Hydroxyquinol 1,2-dioxygenase; [Q] COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
  
   
 0.764
pcaF
Beta-ketoadipyl CoA thiolase; [I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.716
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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