STRINGSTRING
AFY18434.1 AFY18434.1 cscA cscA AFY19631.1 AFY19631.1 AFY20566.1 AFY20566.1 AFY21023.1 AFY21023.1 nagE nagE AFY18435.1 AFY18435.1 AFY19367.1 AFY19367.1 amiC amiC AFY18436.1 AFY18436.1 AFY20592.1 AFY20592.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY18434.1Glycoside hydrolase family protein; [G] COG1472 Beta-glucosidase-related glycosidases. (763 aa)    
Predicted Functional Partners:
cscA
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.918
AFY19631.1
[K] COG1609 Transcriptional regulators.
 
   
 0.560
AFY20566.1
Sucrose operon repressor; [K] COG1609 Transcriptional regulators.
 
   
 0.549
AFY21023.1
Hypothetical protein.
  
  
 0.545
nagE
PTS system, N-acetylglucosamine-specific IIBC component; [G] COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
  
 0.531
AFY18435.1
LemA family protein; [S] COG1704 Uncharacterized conserved protein.
       0.525
AFY19367.1
Cyclic beta 1-2 glucan synthetase; [G] COG3459 Cellobiose phosphorylase.
     
 0.499
amiC
[M] COG0860 N-acetylmuramoyl-L-alanine amidase.
     
 0.491
AFY18436.1
Hypothetical protein; [R] COG1512 Beta-propeller domains of methanol dehydrogenase type.
       0.477
AFY20592.1
[K] COG1609 Transcriptional regulators.
 
   
 0.457
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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