STRINGSTRING
AFY18447.1 AFY18447.1 AFY17433.1 AFY17433.1 AFY17226.1 AFY17226.1 AFY22134.1 AFY22134.1 psiF psiF AFY22558.1 AFY22558.1 pfpI pfpI AFY18446.1 AFY18446.1 AFY22132.1 AFY22132.1 osmC osmC AFY17302.1 AFY17302.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY18447.1Hypothetical protein; [S] COG3422 Uncharacterized conserved protein. (114 aa)    
Predicted Functional Partners:
AFY17433.1
[S] COG1652 Uncharacterized protein containing LysM domain.
 
   0.890
AFY17226.1
[S] COG1652 Uncharacterized protein containing LysM domain.
 
   0.770
AFY22134.1
SpoVR family protein; [S] COG2719 Uncharacterized conserved protein.
   
  
 0.650
psiF
Phosphate starvation-inducible protein PsiF.
   
    0.634
AFY22558.1
[S] COG2261 Predicted membrane protein.
 
  
 0.594
pfpI
Peptidase C56, PfpI; [R] COG0693 Putative intracellular protease/amidase.
  
    0.572
AFY18446.1
Hypothetical protein.
       0.506
AFY22132.1
PrkA family serine protein kinase; [T] COG2766 Putative Ser protein kinase.
   
    0.503
osmC
Peroxiredoxin; [O] COG1764 Predicted redox protein, regulator of disulfide bond formation.
   
    0.459
AFY17302.1
Hypothetical protein.
   
    0.457
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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