STRINGSTRING
tctC tctC tctB tctB AFY18474.1 AFY18474.1 AFY19252.1 AFY19252.1 AFY19254.1 AFY19254.1 AFY21191.1 AFY21191.1 AFY18473.1 AFY18473.1 AFY19253.1 AFY19253.1 AFY21190.1 AFY21190.1 AFY18478.1 AFY18478.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tctCTricarboxylate transport protein TctC; [S] COG3181 Uncharacterized protein conserved in bacteria. (325 aa)    
Predicted Functional Partners:
tctB
Tricarboxylate transport protein TctB.
 
  
 0.968
AFY18474.1
[S] COG3333 Uncharacterized protein conserved in bacteria.
 
  
 0.951
AFY19252.1
[S] COG3181 Uncharacterized protein conserved in bacteria.
  
  
 
0.926
AFY19254.1
[S] COG3333 Uncharacterized protein conserved in bacteria.
 
  
 0.884
AFY21191.1
[S] COG3333 Uncharacterized protein conserved in bacteria.
 
  
 0.883
AFY18473.1
[R] COG3180 Putative ammonia monooxygenase.
 
    0.881
AFY19253.1
Hypothetical protein.
 
  
 0.599
AFY21190.1
Hypothetical protein.
 
  
 0.590
AFY18478.1
[T] COG0642 Signal transduction histidine kinase.
 
   
 0.411
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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