Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY18473.1 | AFY18474.1 | PputUW4_01267 | PputUW4_01268 | [R] COG3180 Putative ammonia monooxygenase. | [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.886 |
AFY18473.1 | AFY19252.1 | PputUW4_01267 | PputUW4_02049 | [R] COG3180 Putative ammonia monooxygenase. | [S] COG3181 Uncharacterized protein conserved in bacteria. | 0.456 |
AFY18473.1 | AFY19254.1 | PputUW4_01267 | PputUW4_02051 | [R] COG3180 Putative ammonia monooxygenase. | [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.462 |
AFY18473.1 | AFY21191.1 | PputUW4_01267 | PputUW4_03999 | [R] COG3180 Putative ammonia monooxygenase. | [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.478 |
AFY18473.1 | tctB | PputUW4_01267 | PputUW4_01269 | [R] COG3180 Putative ammonia monooxygenase. | Tricarboxylate transport protein TctB. | 0.926 |
AFY18473.1 | tctC | PputUW4_01267 | PputUW4_01270 | [R] COG3180 Putative ammonia monooxygenase. | Tricarboxylate transport protein TctC; [S] COG3181 Uncharacterized protein conserved in bacteria. | 0.881 |
AFY18474.1 | AFY18473.1 | PputUW4_01268 | PputUW4_01267 | [S] COG3333 Uncharacterized protein conserved in bacteria. | [R] COG3180 Putative ammonia monooxygenase. | 0.886 |
AFY18474.1 | AFY19252.1 | PputUW4_01268 | PputUW4_02049 | [S] COG3333 Uncharacterized protein conserved in bacteria. | [S] COG3181 Uncharacterized protein conserved in bacteria. | 0.879 |
AFY18474.1 | AFY19253.1 | PputUW4_01268 | PputUW4_02050 | [S] COG3333 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.650 |
AFY18474.1 | AFY19254.1 | PputUW4_01268 | PputUW4_02051 | [S] COG3333 Uncharacterized protein conserved in bacteria. | [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.910 |
AFY18474.1 | AFY21190.1 | PputUW4_01268 | PputUW4_03998 | [S] COG3333 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.619 |
AFY18474.1 | AFY21191.1 | PputUW4_01268 | PputUW4_03999 | [S] COG3333 Uncharacterized protein conserved in bacteria. | [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.910 |
AFY18474.1 | tctB | PputUW4_01268 | PputUW4_01269 | [S] COG3333 Uncharacterized protein conserved in bacteria. | Tricarboxylate transport protein TctB. | 0.963 |
AFY18474.1 | tctC | PputUW4_01268 | PputUW4_01270 | [S] COG3333 Uncharacterized protein conserved in bacteria. | Tricarboxylate transport protein TctC; [S] COG3181 Uncharacterized protein conserved in bacteria. | 0.951 |
AFY18478.1 | tctB | PputUW4_01272 | PputUW4_01269 | [T] COG0642 Signal transduction histidine kinase. | Tricarboxylate transport protein TctB. | 0.530 |
AFY18478.1 | tctC | PputUW4_01272 | PputUW4_01270 | [T] COG0642 Signal transduction histidine kinase. | Tricarboxylate transport protein TctC; [S] COG3181 Uncharacterized protein conserved in bacteria. | 0.411 |
AFY19252.1 | AFY18473.1 | PputUW4_02049 | PputUW4_01267 | [S] COG3181 Uncharacterized protein conserved in bacteria. | [R] COG3180 Putative ammonia monooxygenase. | 0.456 |
AFY19252.1 | AFY18474.1 | PputUW4_02049 | PputUW4_01268 | [S] COG3181 Uncharacterized protein conserved in bacteria. | [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.879 |
AFY19252.1 | AFY19253.1 | PputUW4_02049 | PputUW4_02050 | [S] COG3181 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.960 |
AFY19252.1 | AFY19254.1 | PputUW4_02049 | PputUW4_02051 | [S] COG3181 Uncharacterized protein conserved in bacteria. | [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.966 |
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