Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY17975.1 | AFY18368.1 | PputUW4_00768 | PputUW4_01161 | [S] COG3164 Predicted membrane protein. | Hypothetical protein. | 0.428 |
| AFY17975.1 | AFY20075.1 | PputUW4_00768 | PputUW4_02880 | [S] COG3164 Predicted membrane protein. | Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. | 0.680 |
| AFY17975.1 | lppC | PputUW4_00768 | PputUW4_04516 | [S] COG3164 Predicted membrane protein. | Lipoprotein; [R] COG3107 Putative lipoprotein. | 0.719 |
| AFY17975.1 | mucA | PputUW4_00768 | PputUW4_01279 | [S] COG3164 Predicted membrane protein. | Sigma factor algU negative regulatory protein MucA; [T] COG3073 Negative regulator of sigma E activity. | 0.732 |
| AFY17975.1 | mucB | PputUW4_00768 | PputUW4_01280 | [S] COG3164 Predicted membrane protein. | Sigma factor algU regulatory protein MucB; [T] COG3026 Negative regulator of sigma E activity. | 0.515 |
| AFY17975.1 | recO | PputUW4_00768 | PputUW4_00960 | [S] COG3164 Predicted membrane protein. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.505 |
| AFY18368.1 | AFY17975.1 | PputUW4_01161 | PputUW4_00768 | Hypothetical protein. | [S] COG3164 Predicted membrane protein. | 0.428 |
| AFY18368.1 | mucB | PputUW4_01161 | PputUW4_01280 | Hypothetical protein. | Sigma factor algU regulatory protein MucB; [T] COG3026 Negative regulator of sigma E activity. | 0.496 |
| AFY18487.1 | algU | PputUW4_01281 | PputUW4_01278 | Protease Do; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.588 |
| AFY18487.1 | mucA | PputUW4_01281 | PputUW4_01279 | Protease Do; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Sigma factor algU negative regulatory protein MucA; [T] COG3073 Negative regulator of sigma E activity. | 0.888 |
| AFY18487.1 | mucB | PputUW4_01281 | PputUW4_01280 | Protease Do; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Sigma factor algU regulatory protein MucB; [T] COG3026 Negative regulator of sigma E activity. | 0.673 |
| AFY18487.1 | rseP | PputUW4_01281 | PputUW4_01095 | Protease Do; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Membrane-associated zinc metalloprotease; [M] COG0750 Predicted membrane-associated Zn-dependent proteases 1. | 0.552 |
| AFY20075.1 | AFY17975.1 | PputUW4_02880 | PputUW4_00768 | Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. | [S] COG3164 Predicted membrane protein. | 0.680 |
| AFY20075.1 | lppC | PputUW4_02880 | PputUW4_04516 | Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. | Lipoprotein; [R] COG3107 Putative lipoprotein. | 0.558 |
| AFY20075.1 | mucB | PputUW4_02880 | PputUW4_01280 | Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. | Sigma factor algU regulatory protein MucB; [T] COG3026 Negative regulator of sigma E activity. | 0.668 |
| AFY20075.1 | recO | PputUW4_02880 | PputUW4_00960 | Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.487 |
| algU | AFY18487.1 | PputUW4_01278 | PputUW4_01281 | [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Protease Do; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.588 |
| algU | mucA | PputUW4_01278 | PputUW4_01279 | [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Sigma factor algU negative regulatory protein MucA; [T] COG3073 Negative regulator of sigma E activity. | 0.966 |
| algU | mucB | PputUW4_01278 | PputUW4_01280 | [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Sigma factor algU regulatory protein MucB; [T] COG3026 Negative regulator of sigma E activity. | 0.908 |
| cysB | mucB | PputUW4_01421 | PputUW4_01280 | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Sigma factor algU regulatory protein MucB; [T] COG3026 Negative regulator of sigma E activity. | 0.483 |
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