Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY17993.1 | AFY18488.1 | PputUW4_00786 | PputUW4_01282 | Toluene tolerance protein; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.529 |
| AFY17993.1 | AFY18494.1 | PputUW4_00786 | PputUW4_01288 | Toluene tolerance protein; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | NlpB/DapX lipoprotein. | 0.676 |
| AFY17993.1 | AFY21748.1 | PputUW4_00786 | PputUW4_04556 | Toluene tolerance protein; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | Lipoprotein. | 0.611 |
| AFY17993.1 | AFY21771.1 | PputUW4_00786 | PputUW4_04579 | Toluene tolerance protein; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | TPR domain-containing protein; [R] COG0457 FOG: TPR repeat. | 0.455 |
| AFY17993.1 | lptD | PputUW4_00786 | PputUW4_04935 | Toluene tolerance protein; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.716 |
| AFY18488.1 | AFY17993.1 | PputUW4_01282 | PputUW4_00786 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Toluene tolerance protein; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | 0.529 |
| AFY18488.1 | AFY18489.1 | PputUW4_01282 | PputUW4_01283 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | SirA family protein; [O] COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family. | 0.613 |
| AFY18488.1 | AFY18490.1 | PputUW4_01282 | PputUW4_01284 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | [R] COG0628 Predicted permease. | 0.556 |
| AFY18488.1 | AFY18494.1 | PputUW4_01282 | PputUW4_01288 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | NlpB/DapX lipoprotein. | 0.513 |
| AFY18488.1 | AFY21229.1 | PputUW4_01282 | PputUW4_04037 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. | 0.460 |
| AFY18488.1 | AFY21748.1 | PputUW4_01282 | PputUW4_04556 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Lipoprotein. | 0.437 |
| AFY18488.1 | AFY21771.1 | PputUW4_01282 | PputUW4_04579 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | TPR domain-containing protein; [R] COG0457 FOG: TPR repeat. | 0.518 |
| AFY18488.1 | lptD | PputUW4_01282 | PputUW4_04935 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.587 |
| AFY18488.1 | polA | PputUW4_01282 | PputUW4_00070 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.441 |
| AFY18488.1 | yaeT | PputUW4_01282 | PputUW4_01096 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Outer membrane protein assembly complex,YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.555 |
| AFY18489.1 | AFY18488.1 | PputUW4_01283 | PputUW4_01282 | SirA family protein; [O] COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family. | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.613 |
| AFY18489.1 | AFY18490.1 | PputUW4_01283 | PputUW4_01284 | SirA family protein; [O] COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family. | [R] COG0628 Predicted permease. | 0.767 |
| AFY18490.1 | AFY18488.1 | PputUW4_01284 | PputUW4_01282 | [R] COG0628 Predicted permease. | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.556 |
| AFY18490.1 | AFY18489.1 | PputUW4_01284 | PputUW4_01283 | [R] COG0628 Predicted permease. | SirA family protein; [O] COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family. | 0.767 |
| AFY18494.1 | AFY17993.1 | PputUW4_01288 | PputUW4_00786 | NlpB/DapX lipoprotein. | Toluene tolerance protein; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | 0.676 |
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