STRINGSTRING
AFY18550.1 AFY18550.1 bolA bolA AFY17641.1 AFY17641.1 AFY18604.1 AFY18604.1 AFY19165.1 AFY19165.1 AFY19166.1 AFY19166.1 algX algX AFY17776.1 AFY17776.1 AFY21352.1 AFY21352.1 AFY17306.1 AFY17306.1 AFY18370.1 AFY18370.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY18550.1[S] COG3184 Uncharacterized protein conserved in bacteria. (174 aa)    
Predicted Functional Partners:
bolA
Transcriptional regulator BolA; [T] COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family.
  
    0.875
AFY17641.1
HAMP domain protein; [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression.
  
     0.752
AFY18604.1
CHAD domain protein.
  
     0.711
AFY19165.1
Hypothetical protein.
  
    0.706
AFY19166.1
Hypothetical protein.
  
     0.693
algX
Alginate biosynthesis protein AlgX.
  
     0.663
AFY17776.1
Lipoprotein.
  
     0.639
AFY21352.1
Arc-like DNA binding protein.
  
   
 0.627
AFY17306.1
Hypothetical protein.
  
     0.623
AFY18370.1
Hypothetical protein.
  
     0.612
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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