STRINGSTRING
AFY18554.1 AFY18554.1 AFY18553.1 AFY18553.1 AFY18552.1 AFY18552.1 pvdD pvdD pvdI pvdI AFY17324.1 AFY17324.1 AFY18550.1 AFY18550.1 AFY21144.1 AFY21144.1 AFY17858.1 AFY17858.1 bolA bolA ccmD ccmD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY18554.1ABC transporter family protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. (605 aa)    
Predicted Functional Partners:
AFY18553.1
[O] COG3531 Predicted protein-disulfide isomerase.
 
    0.828
AFY18552.1
Hypothetical protein; [R] COG1054 Predicted sulfurtransferase; Belongs to the UPF0176 family.
       0.807
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.680
pvdI
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.615
AFY17324.1
Type I secretion system ATPase family protein; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
 
 
0.601
AFY18550.1
[S] COG3184 Uncharacterized protein conserved in bacteria.
 
     0.601
AFY21144.1
Type I secretion system ATPase; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
 
 
0.597
AFY17858.1
ATPase central domain-containing protein; [O] COG0464 ATPases of the AAA+ class.
   
 0.573
bolA
Transcriptional regulator BolA; [T] COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family.
       0.541
ccmD
Cytochrome c-type biogenesis protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
  
     0.474
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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