STRINGSTRING
cysB cysB AFY18936.1 AFY18936.1 AFY18626.1 AFY18626.1 AFY21192.1 AFY21192.1 AFY19116.1 AFY19116.1 mucB mucB AFY18625.1 AFY18625.1 AFY21172.1 AFY21172.1 AFY22477.1 AFY22477.1 panE1 panE1 AFY18623.1 AFY18623.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
cysB[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (324 aa)    
Predicted Functional Partners:
AFY18936.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.612
AFY18626.1
[T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
       0.583
AFY21192.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
   
 0.527
AFY19116.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.516
mucB
Sigma factor algU regulatory protein MucB; [T] COG3026 Negative regulator of sigma E activity.
  
     0.483
AFY18625.1
5-nucleotidase; [F] COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
       0.462
AFY21172.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.461
AFY22477.1
[S] COG3159 Uncharacterized protein conserved in bacteria.
  
     0.457
panE1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.436
AFY18623.1
Hypothetical protein; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
       0.428
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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