Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY18634.1 | AFY18635.1 | PputUW4_01428 | PputUW4_01429 | Organic hydroperoxide resistance transcriptional regulator; [K] COG1846 Transcriptional regulators. | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.583 |
AFY18634.1 | AFY18636.1 | PputUW4_01428 | PputUW4_01430 | Organic hydroperoxide resistance transcriptional regulator; [K] COG1846 Transcriptional regulators. | Hypothetical protein; [R] COG0730 Predicted permeases. | 0.454 |
AFY18634.1 | AFY18649.1 | PputUW4_01428 | PputUW4_01443 | Organic hydroperoxide resistance transcriptional regulator; [K] COG1846 Transcriptional regulators. | [O] COG0386 Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.602 |
AFY18634.1 | ohr | PputUW4_01428 | PputUW4_01427 | Organic hydroperoxide resistance transcriptional regulator; [K] COG1846 Transcriptional regulators. | Organic hydroperoxide resistance protein; [O] COG1764 Predicted redox protein, regulator of disulfide bond formation. | 0.722 |
AFY18635.1 | AFY18634.1 | PputUW4_01429 | PputUW4_01428 | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Organic hydroperoxide resistance transcriptional regulator; [K] COG1846 Transcriptional regulators. | 0.583 |
AFY18635.1 | AFY18636.1 | PputUW4_01429 | PputUW4_01430 | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein; [R] COG0730 Predicted permeases. | 0.555 |
AFY18636.1 | AFY18634.1 | PputUW4_01430 | PputUW4_01428 | Hypothetical protein; [R] COG0730 Predicted permeases. | Organic hydroperoxide resistance transcriptional regulator; [K] COG1846 Transcriptional regulators. | 0.454 |
AFY18636.1 | AFY18635.1 | PputUW4_01430 | PputUW4_01429 | Hypothetical protein; [R] COG0730 Predicted permeases. | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.555 |
AFY18649.1 | AFY18634.1 | PputUW4_01443 | PputUW4_01428 | [O] COG0386 Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Organic hydroperoxide resistance transcriptional regulator; [K] COG1846 Transcriptional regulators. | 0.602 |
ohr | AFY18634.1 | PputUW4_01427 | PputUW4_01428 | Organic hydroperoxide resistance protein; [O] COG1764 Predicted redox protein, regulator of disulfide bond formation. | Organic hydroperoxide resistance transcriptional regulator; [K] COG1846 Transcriptional regulators. | 0.722 |