STRINGSTRING
pcaD2 pcaD2 catC catC AFY20414.1 AFY20414.1 pvdD pvdD AFY19354.1 AFY19354.1 phaZ2 phaZ2 pcaC1 pcaC1 catJ catJ AFY17964.1 AFY17964.1 pcaC2 pcaC2 phaZ1 phaZ1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
pcaD23-oxoadipate enol-lactonase; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (272 aa)    
Predicted Functional Partners:
catC
[Q] COG4829 Muconolactone delta-isomerase.
  
 
 0.717
AFY20414.1
Alpha/beta hydrolase fold family protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
   
 0.680
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.668
AFY19354.1
[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
   
 0.665
phaZ2
Poly(3-hydroxyalkanoate) depolymerase; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.664
pcaC1
4-carboxymuconolactone decarboxylase; [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
 
 0.657
catJ
[I] COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 
 
 0.613
AFY17964.1
4-carboxymuconolactone decarboxylase; [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
 
 0.609
pcaC2
[S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
 
 0.605
phaZ1
Poly(3-hydroxyalkanoate) depolymerase; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.604
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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