STRINGSTRING
AFY18728.1 AFY18728.1 AFY18732.1 AFY18732.1 wbpX wbpX AFY18731.1 AFY18731.1 AFY18735.1 AFY18735.1 AFY18733.1 AFY18733.1 gmd gmd AFY18729.1 AFY18729.1 treZ treZ glgB glgB algD algD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY18728.1[M] COG0438 Glycosyltransferase. (376 aa)    
Predicted Functional Partners:
AFY18732.1
ABC transporter permease; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.950
wbpX
[M] COG0438 Glycosyltransferase.
 
   
 0.945
AFY18731.1
ABC transporter ATP-binding protein; [G] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
 
 0.938
AFY18735.1
NAD-dependent epimerase/dehydratase; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
 
  
 0.921
AFY18733.1
[M] COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.897
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
  
 0.896
AFY18729.1
[M] COG0438 Glycosyltransferase.
 
   
0.863
treZ
Malto-oligosyltrehalose trehalohydrolase; [G] COG0296 1,4-alpha-glucan branching enzyme.
   
 0.551
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.551
algD
[M] COG1004 Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.551
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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