STRINGSTRING
wbpX wbpX AFY18729.1 AFY18729.1 AFY18728.1 AFY18728.1 AFY18732.1 AFY18732.1 AFY18731.1 AFY18731.1 AFY18735.1 AFY18735.1 gmd gmd AFY18733.1 AFY18733.1 AFY18736.1 AFY18736.1 AFY18737.1 AFY18737.1 AFY18740.1 AFY18740.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wbpX[M] COG0438 Glycosyltransferase. (458 aa)    
Predicted Functional Partners:
AFY18729.1
[M] COG0438 Glycosyltransferase.
    
0.956
AFY18728.1
[M] COG0438 Glycosyltransferase.
 
   
 0.945
AFY18732.1
ABC transporter permease; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.940
AFY18731.1
ABC transporter ATP-binding protein; [G] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
 
 0.935
AFY18735.1
NAD-dependent epimerase/dehydratase; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
 
  
 0.929
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
  
 0.921
AFY18733.1
[M] COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.904
AFY18736.1
Hypothetical protein; [M] COG0438 Glycosyltransferase.
 
 
 
 0.787
AFY18737.1
Hypothetical protein; [M] COG0438 Glycosyltransferase.
 
 
 
 0.733
AFY18740.1
Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases.
 
   
 0.704
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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