STRINGSTRING
AFY18731.1 AFY18731.1 AFY18732.1 AFY18732.1 AFY18728.1 AFY18728.1 wbpX wbpX AFY18729.1 AFY18729.1 AFY18735.1 AFY18735.1 gmd gmd AFY18733.1 AFY18733.1 atpD atpD AFY21088.1 AFY21088.1 atpA atpA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY18731.1ABC transporter ATP-binding protein; [G] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (419 aa)    
Predicted Functional Partners:
AFY18732.1
ABC transporter permease; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.991
AFY18728.1
[M] COG0438 Glycosyltransferase.
 
 
 0.938
wbpX
[M] COG0438 Glycosyltransferase.
 
 
 0.935
AFY18729.1
[M] COG0438 Glycosyltransferase.
 
 
 0.921
AFY18735.1
NAD-dependent epimerase/dehydratase; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
 
  
 0.881
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
   
 0.854
AFY18733.1
[M] COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
    0.836
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
  
 
 
 0.568
AFY21088.1
[M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.560
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
  
 
 
 0.549
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
Server load: very high (>100%) [ZH]