STRINGSTRING
AFY18740.1 AFY18740.1 AFY18736.1 AFY18736.1 AFY18737.1 AFY18737.1 AFY18738.1 AFY18738.1 AFY18739.1 AFY18739.1 wbpX wbpX AFY17573.1 AFY17573.1 AFY18728.1 AFY18728.1 katE2 katE2 AFY18729.1 AFY18729.1 AFY18732.1 AFY18732.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY18740.1Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. (277 aa)    
Predicted Functional Partners:
AFY18736.1
Hypothetical protein; [M] COG0438 Glycosyltransferase.
 
   
 0.942
AFY18737.1
Hypothetical protein; [M] COG0438 Glycosyltransferase.
 
   
 0.929
AFY18738.1
Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases.
 
    
0.821
AFY18739.1
Acyltransferase family protein; [I] COG1835 Predicted acyltransferases.
     
 0.780
wbpX
[M] COG0438 Glycosyltransferase.
 
   
 0.704
AFY17573.1
Sodium/hydrogen exchanger family protein.
 
   
 0.620
AFY18728.1
[M] COG0438 Glycosyltransferase.
 
   
 0.542
katE2
Catalase; [P] COG0753 Catalase.
  
 
   0.532
AFY18729.1
[M] COG0438 Glycosyltransferase.
 
     0.499
AFY18732.1
ABC transporter permease; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
   
 0.485
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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