STRINGSTRING
AFY18792.1 AFY18792.1 AFY18790.1 AFY18790.1 AFY18791.1 AFY18791.1 AFY20498.1 AFY20498.1 AFY18789.1 AFY18789.1 AFY18793.1 AFY18793.1 AFY18787.1 AFY18787.1 AFY21831.1 AFY21831.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY18792.1Isochorismatase superfamily hydrolase; [Q] COG1335 Amidases related to nicotinamidase. (208 aa)    
Predicted Functional Partners:
AFY18790.1
[R] COG1741 Pirin-related protein; Belongs to the pirin family.
 
  
 0.679
AFY18791.1
Isochorismatase family protein; [Q] COG1335 Amidases related to nicotinamidase.
 
    
0.630
AFY20498.1
Amidohydrolase; [R] COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold.
 
   
 0.620
AFY18789.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.555
AFY18793.1
[M] COG0668 Small-conductance mechanosensitive channel.
  
  
 0.480
AFY18787.1
2,5-diketo-D-gluconate reductase B; [R] COG0656 Aldo/keto reductases, related to diketogulonate reductase.
  
    0.444
AFY21831.1
Transport-associated protein; [R] COG2823 Predicted periplasmic or secreted lipoprotein.
  
    0.427
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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