Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY18822.1 | AFY18823.1 | PputUW4_01617 | PputUW4_01618 | Hypothetical protein. | Hypothetical protein. | 0.705 |
AFY18822.1 | selD | PputUW4_01617 | PputUW4_01619 | Hypothetical protein. | Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP. | 0.454 |
AFY18822.1 | selU | PputUW4_01617 | PputUW4_01620 | Hypothetical protein. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.454 |
AFY18823.1 | AFY18822.1 | PputUW4_01618 | PputUW4_01617 | Hypothetical protein. | Hypothetical protein. | 0.705 |
AFY18823.1 | selD | PputUW4_01618 | PputUW4_01619 | Hypothetical protein. | Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP. | 0.503 |
AFY18823.1 | selU | PputUW4_01618 | PputUW4_01620 | Hypothetical protein. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.503 |
selD | AFY18822.1 | PputUW4_01619 | PputUW4_01617 | Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP. | Hypothetical protein. | 0.454 |
selD | AFY18823.1 | PputUW4_01619 | PputUW4_01618 | Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP. | Hypothetical protein. | 0.503 |
selD | selU | PputUW4_01619 | PputUW4_01620 | Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.967 |
selU | AFY18822.1 | PputUW4_01620 | PputUW4_01617 | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | Hypothetical protein. | 0.454 |
selU | AFY18823.1 | PputUW4_01620 | PputUW4_01618 | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | Hypothetical protein. | 0.503 |
selU | selD | PputUW4_01620 | PputUW4_01619 | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP. | 0.967 |