STRINGSTRING
AFY18837.1 AFY18837.1 AFY18836.1 AFY18836.1 metH metH AFY19136.1 AFY19136.1 AFY19622.1 AFY19622.1 AFY19669.1 AFY19669.1 AFY20117.1 AFY20117.1 AFY17623.1 AFY17623.1 pvdD pvdD AFY21719.1 AFY21719.1 AFY19647.1 AFY19647.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY18837.1[R] COG0656 Aldo/keto reductases, related to diketogulonate reductase. (273 aa)    
Predicted Functional Partners:
AFY18836.1
Hypothetical protein.
       0.682
metH
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.627
AFY19136.1
[C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
 
 0.571
AFY19622.1
[C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
 
0.548
AFY19669.1
Aldo/keto reductase family protein; [R] COG4989 Predictedoxidoreductase.
 
 
0.546
AFY20117.1
Short chain dehydrogenase; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.531
AFY17623.1
Aldo/keto reductase family protein; [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
 
0.528
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.513
AFY21719.1
[C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
 
0.512
AFY19647.1
[C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
 
0.510
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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