STRINGSTRING
AFY18847.1 AFY18847.1 hemN1 hemN1 AFY20970.1 AFY20970.1 AFY21402.1 AFY21402.1 AFY18848.1 AFY18848.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY18847.1Peptidase U32; [O] COG0826 Collagenase and related proteases. (441 aa)    
Predicted Functional Partners:
hemN1
[H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.606
AFY20970.1
O-methyltransferase; [R] COG4122 Predicted O-methyltransferase.
  
  
 0.545
AFY21402.1
dTDP-6-deoxy-L-hexose 3-O-methyltransferase.
  
  
 0.545
AFY18848.1
Hypothetical protein; [R] COG0628 Predicted permease.
  
    0.536
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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