STRINGSTRING
AFY18899.1 AFY18899.1 AFY18897.1 AFY18897.1 AFY18898.1 AFY18898.1 AFY18895.1 AFY18895.1 AFY18894.1 AFY18894.1 AFY18892.1 AFY18892.1 AFY18893.1 AFY18893.1 AFY18900.1 AFY18900.1 AFY18896.1 AFY18896.1 AFY18856.1 AFY18856.1 AFY18901.1 AFY18901.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AFY18899.1[I] COG1960 Acyl-CoA dehydrogenases. (351 aa)    
Predicted Functional Partners:
AFY18897.1
[I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.968
AFY18898.1
[I] COG1960 Acyl-CoA dehydrogenases.
     0.958
AFY18895.1
[I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.956
AFY18894.1
CoA-transferase, beta subunit; [I] COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 
  
 0.912
AFY18892.1
2,3-dihydroxybiphenyl-1,2-dioxygenase; [E] COG0346 Lactoylglutathione lyase and related lyases.
 
  
 0.902
AFY18893.1
CoA-transferase subunit alpha; [I] COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 
  
 0.898
AFY18900.1
[I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.895
AFY18896.1
[R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
 
  
 0.889
AFY18856.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
     0.869
AFY18901.1
Short chain dehydrogenase; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  0.868
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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