Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17325.1 | AFY18924.1 | PputUW4_00117 | PputUW4_01719 | [M] COG0845 Membrane-fusion protein. | [MU] COG1538 Outer membrane protein. | 0.543 |
AFY17325.1 | AFY18926.1 | PputUW4_00117 | PputUW4_01721 | [M] COG0845 Membrane-fusion protein. | [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.588 |
AFY17325.1 | AFY19478.1 | PputUW4_00117 | PputUW4_02279 | [M] COG0845 Membrane-fusion protein. | Hemolysin-type calcium-binding region; [Q] COG2931 RTX toxins and related Ca2+-binding proteins. | 0.509 |
AFY17325.1 | AFY19826.1 | PputUW4_00117 | PputUW4_02631 | [M] COG0845 Membrane-fusion protein. | Mannuronan C-5-epimerase, multi-domains protein; [Q] COG2931 RTX toxins and related Ca2+-binding proteins. | 0.453 |
AFY17325.1 | prtD | PputUW4_00117 | PputUW4_02633 | [M] COG0845 Membrane-fusion protein. | [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.630 |
AFY18924.1 | AFY17325.1 | PputUW4_01719 | PputUW4_00117 | [MU] COG1538 Outer membrane protein. | [M] COG0845 Membrane-fusion protein. | 0.543 |
AFY18924.1 | AFY18925.1 | PputUW4_01719 | PputUW4_01720 | [MU] COG1538 Outer membrane protein. | [M] COG0845 Membrane-fusion protein. | 0.937 |
AFY18924.1 | AFY18926.1 | PputUW4_01719 | PputUW4_01721 | [MU] COG1538 Outer membrane protein. | [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.885 |
AFY18924.1 | AFY19381.1 | PputUW4_01719 | PputUW4_02182 | [MU] COG1538 Outer membrane protein. | Heme peroxidase; [Q] COG2931 RTX toxins and related Ca2+-binding proteins. | 0.481 |
AFY18924.1 | AFY19827.1 | PputUW4_01719 | PputUW4_02632 | [MU] COG1538 Outer membrane protein. | [M] COG0845 Membrane-fusion protein. | 0.630 |
AFY18924.1 | AFY21145.1 | PputUW4_01719 | PputUW4_03953 | [MU] COG1538 Outer membrane protein. | [M] COG0845 Membrane-fusion protein. | 0.482 |
AFY18924.1 | prtD | PputUW4_01719 | PputUW4_02633 | [MU] COG1538 Outer membrane protein. | [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.433 |
AFY18925.1 | AFY18924.1 | PputUW4_01720 | PputUW4_01719 | [M] COG0845 Membrane-fusion protein. | [MU] COG1538 Outer membrane protein. | 0.937 |
AFY18925.1 | AFY18926.1 | PputUW4_01720 | PputUW4_01721 | [M] COG0845 Membrane-fusion protein. | [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.956 |
AFY18925.1 | AFY19381.1 | PputUW4_01720 | PputUW4_02182 | [M] COG0845 Membrane-fusion protein. | Heme peroxidase; [Q] COG2931 RTX toxins and related Ca2+-binding proteins. | 0.654 |
AFY18925.1 | AFY19478.1 | PputUW4_01720 | PputUW4_02279 | [M] COG0845 Membrane-fusion protein. | Hemolysin-type calcium-binding region; [Q] COG2931 RTX toxins and related Ca2+-binding proteins. | 0.659 |
AFY18925.1 | AFY19826.1 | PputUW4_01720 | PputUW4_02631 | [M] COG0845 Membrane-fusion protein. | Mannuronan C-5-epimerase, multi-domains protein; [Q] COG2931 RTX toxins and related Ca2+-binding proteins. | 0.620 |
AFY18925.1 | prtD | PputUW4_01720 | PputUW4_02633 | [M] COG0845 Membrane-fusion protein. | [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.814 |
AFY18926.1 | AFY17325.1 | PputUW4_01721 | PputUW4_00117 | [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | [M] COG0845 Membrane-fusion protein. | 0.588 |
AFY18926.1 | AFY18924.1 | PputUW4_01721 | PputUW4_01719 | [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | [MU] COG1538 Outer membrane protein. | 0.885 |
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