STRINGSTRING
AFY18935.1 AFY18935.1 AFY18936.1 AFY18936.1 AFY18934.1 AFY18934.1 AFY19163.1 AFY19163.1 AFY19164.1 AFY19164.1 AFY20671.1 AFY20671.1 AFY18938.1 AFY18938.1 AFY20541.1 AFY20541.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY18935.1Metallo-beta-lactamase family protein; [Q] COG2015 Alkyl sulfatase and related hydrolases. (678 aa)    
Predicted Functional Partners:
AFY18936.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.524
AFY18934.1
[I] COG2067 Long-chain fatty acid transport protein.
 
     0.521
AFY19163.1
Hypothetical protein.
 
     0.476
AFY19164.1
Hypothetical protein.
 
     0.467
AFY20671.1
Hypothetical protein; [S] COG5361 Uncharacterized conserved protein.
 
     0.419
AFY18938.1
[P] COG3119 Arylsulfatase A and related enzymes.
 
   
 0.413
AFY20541.1
Hypothetical protein; [S] COG5361 Uncharacterized conserved protein.
 
     0.402
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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