STRINGSTRING
AFY18973.1 AFY18973.1 AFY18972.1 AFY18972.1 cbpA cbpA AFY18766.1 AFY18766.1 cadR cadR dnaJ dnaJ AFY18975.1 AFY18975.1 AFY17818.1 AFY17818.1 cueR cueR AFY18974.1 AFY18974.1 rpoB rpoB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY18973.1[K] COG0789 Predicted transcriptional regulators. (133 aa)    
Predicted Functional Partners:
AFY18972.1
hydroxymethylglutaryl-CoA lyase; [E] COG0119 Isopropylmalate/homocitrate/citramalate synthases.
 
  
 0.686
cbpA
Curved DNA-binding protein; [O] COG2214 DnaJ-class molecular chaperone.
  
 
 0.600
AFY18766.1
[K] COG0789 Predicted transcriptional regulators.
  
   
 0.553
cadR
[K] COG0789 Predicted transcriptional regulators.
  
   
 0.550
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
  
 
 0.517
AFY18975.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
    0.514
AFY17818.1
[K] COG0789 Predicted transcriptional regulators.
  
   
 0.496
cueR
[K] COG0789 Predicted transcriptional regulators.
  
   
 0.493
AFY18974.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.487
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.404
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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