Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY18976.1 | AFY18977.1 | PputUW4_01771 | PputUW4_01772 | OmpA/MotB domain-containing protein; [P] COG0226 ABC-type phosphate transport system, periplasmic component. | Integrase catalytic protein; [L] COG2801 Transposase and inactivated derivatives. | 0.449 |
AFY18977.1 | AFY18976.1 | PputUW4_01772 | PputUW4_01771 | Integrase catalytic protein; [L] COG2801 Transposase and inactivated derivatives. | OmpA/MotB domain-containing protein; [P] COG0226 ABC-type phosphate transport system, periplasmic component. | 0.449 |
AFY18977.1 | AFY20779.1 | PputUW4_01772 | PputUW4_03587 | Integrase catalytic protein; [L] COG2801 Transposase and inactivated derivatives. | Transposon resolvase; [L] COG1961 Site-specific recombinases, DNA invertase Pin homologs. | 0.419 |
AFY18977.1 | xthA1 | PputUW4_01772 | PputUW4_01773 | Integrase catalytic protein; [L] COG2801 Transposase and inactivated derivatives. | [L] COG0708 Exonuclease III. | 0.421 |
AFY20779.1 | AFY18977.1 | PputUW4_03587 | PputUW4_01772 | Transposon resolvase; [L] COG1961 Site-specific recombinases, DNA invertase Pin homologs. | Integrase catalytic protein; [L] COG2801 Transposase and inactivated derivatives. | 0.419 |
xthA1 | AFY18977.1 | PputUW4_01773 | PputUW4_01772 | [L] COG0708 Exonuclease III. | Integrase catalytic protein; [L] COG2801 Transposase and inactivated derivatives. | 0.421 |