STRINGSTRING
AFY19076.1 AFY19076.1 AFY20620.1 AFY20620.1 betA1 betA1 AFY19074.1 AFY19074.1 AFY22571.1 AFY22571.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY19076.1Acetyltransferase; [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (152 aa)    
Predicted Functional Partners:
AFY20620.1
Hypothetical protein.
  
     0.448
betA1
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
     
 0.440
AFY19074.1
Permease for cytosine/purines uracil thiamine allantoin; [F] COG1457 Purine-cytosine permease and related proteins; Belongs to the purine-cytosine permease (2.A.39) family.
       0.438
AFY22571.1
GCN5-related N-acetyltransferase; [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
 
 
 0.408
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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