STRINGSTRING
AFY19093.1 AFY19093.1 AFY19094.1 AFY19094.1 glnA2 glnA2 AFY20241.1 AFY20241.1 glgA glgA AFY18319.1 AFY18319.1 AFY19286.1 AFY19286.1 AFY19092.1 AFY19092.1 pta pta bphG bphG AFY18174.1 AFY18174.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
AFY19093.1[C] COG1454 Alcohol dehydrogenase, class IV. (386 aa)    
Predicted Functional Partners:
AFY19094.1
[C] COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
 
 0.919
glnA2
[E] COG0174 Glutamine synthetase.
 
   
 0.885
AFY20241.1
[R] COG1064 Zn-dependent alcohol dehydrogenases.
  
 
 0.649
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.561
AFY18319.1
[C] COG1062 Zn-dependent alcohol dehydrogenases, class III.
   
 
 0.535
AFY19286.1
[C] COG1062 Zn-dependent alcohol dehydrogenases, class III.
   
 
 0.535
AFY19092.1
Amino acid permease family protein; [E] COG0531 Amino acid transporters.
  
 
 0.529
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  
 0.426
bphG
Biphenyl dioxygenase system ferredoxin--NAD(+) reductase component; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
  
 0.425
AFY18174.1
[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria).
   
  
 0.422
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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