STRINGSTRING
AFY19113.1 AFY19113.1 pvdM pvdM AFY19115.1 AFY19115.1 AFY19114.1 AFY19114.1 AFY18765.1 AFY18765.1 betC betC trpS trpS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY19113.1D-aminopeptidase; [EQ] COG3191 L-aminopeptidase/D-esterase. (380 aa)    
Predicted Functional Partners:
pvdM
Dipeptidase; [E] COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
 
   
 0.496
AFY19115.1
LuxR family transcriptional regulator; [K] COG2771 DNA-binding HTH domain-containing proteins.
 
     0.483
AFY19114.1
Extracellular solute-binding protein; [E] COG0687 Spermidine/putrescine-binding periplasmic protein.
       0.475
AFY18765.1
Hypothetical protein; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
  
     0.465
betC
Choline-sulfatase; [P] COG3119 Arylsulfatase A and related enzymes.
  
     0.428
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.413
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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