STRINGSTRING
AFY19160.1 AFY19160.1 AFY19159.1 AFY19159.1 AFY19958.1 AFY19958.1 AFY20440.1 AFY20440.1 AFY20297.1 AFY20297.1 AFY22496.1 AFY22496.1 AFY18450.1 AFY18450.1 phaAB phaAB phaC phaC phaE phaE phaD2 phaD2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY19160.1[K] COG1396 Predicted transcriptional regulators. (187 aa)    
Predicted Functional Partners:
AFY19159.1
Hypothetical protein; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
 
     0.676
AFY19958.1
[K] COG1396 Predicted transcriptional regulators.
  
  
 0.638
AFY20440.1
[K] COG1396 Predicted transcriptional regulators.
  
  
 0.595
AFY20297.1
[K] COG1396 Predicted transcriptional regulators.
  
  
 0.554
AFY22496.1
[K] COG1476 Predicted transcriptional regulators.
  
   
 0.554
AFY18450.1
[K] COG1396 Predicted transcriptional regulators.
  
   
 0.531
phaAB
K(+)/H(+) antiporter subunit A/B; [CP] COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
     
 0.425
phaC
[P] COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit.
  
    0.421
phaE
[P] COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit.
  
    0.404
phaD2
[CP] COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit.
  
    0.404
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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