STRINGSTRING
AFY19202.1 AFY19202.1 AFY18036.1 AFY18036.1 AFY20163.1 AFY20163.1 pta pta AFY21789.1 AFY21789.1 AFY19083.1 AFY19083.1 AFY19687.1 AFY19687.1 AFY19759.1 AFY19759.1 sodB sodB AFY21811.1 AFY21811.1 yegD yegD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY19202.1[K] COG0846 NAD-dependent protein deacetylases, SIR2 family. (280 aa)    
Predicted Functional Partners:
AFY18036.1
[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.854
AFY20163.1
[Q] COG2124 Cytochrome P450.
   
 0.790
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.731
AFY21789.1
Hypothetical protein.
    
 0.695
AFY19083.1
[C] COG3474 Cytochrome c2.
  
 
 0.625
AFY19687.1
Nicotinamide-nucleotide adenylyltransferase; [H] COG3172 Predicted ATPase/kinase involved in NAD metabolism.
   
  
 0.604
AFY19759.1
Addiction module antidote protein, CC2985 family; [K] COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain.
   
    0.570
sodB
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.567
AFY21811.1
TfoX domain-containing protein; [K] COG3070 Regulator of competence-specific genes.
   
   0.567
yegD
Heat shock protein YegD; [O] COG0443 Molecular chaperone.
   
 0.560
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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