STRINGSTRING
AFY19414.1 AFY19414.1 AFY17868.1 AFY17868.1 AFY19413.1 AFY19413.1 AFY17876.1 AFY17876.1 AFY21789.1 AFY21789.1 AFY17858.1 AFY17858.1 htpG htpG AFY21722.1 AFY21722.1 iaaM iaaM AFY22276.1 AFY22276.1 AFY17813.1 AFY17813.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY19414.1[BQ] COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein. (388 aa)    
Predicted Functional Partners:
AFY17868.1
[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
  
 
 0.768
AFY19413.1
Cytosine/purines uracil thiamine allantoin permease; [F] COG1457 Purine-cytosine permease and related proteins; Belongs to the purine-cytosine permease (2.A.39) family.
       0.757
AFY17876.1
Hypothetical protein.
    
 0.712
AFY21789.1
Hypothetical protein.
  
 0.683
AFY17858.1
ATPase central domain-containing protein; [O] COG0464 ATPases of the AAA+ class.
   
 0.671
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
   
 0.652
AFY21722.1
[E] COG1231 Monoamine oxidase.
   
 0.529
iaaM
Tryptophan 2-monooxygenase; [E] COG1231 Monoamine oxidase.
   
 0.529
AFY22276.1
[E] COG1231 Monoamine oxidase.
   
 0.529
AFY17813.1
Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases.
    
 0.523
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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