Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17813.1 | AFY17868.1 | PputUW4_00605 | PputUW4_00661 | Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. | [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | 0.825 |
AFY17813.1 | AFY17876.1 | PputUW4_00605 | PputUW4_00669 | Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. | Hypothetical protein. | 0.599 |
AFY17813.1 | AFY19414.1 | PputUW4_00605 | PputUW4_02215 | Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. | [BQ] COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein. | 0.523 |
AFY17813.1 | AFY21722.1 | PputUW4_00605 | PputUW4_04530 | Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. | [E] COG1231 Monoamine oxidase. | 0.526 |
AFY17813.1 | AFY21789.1 | PputUW4_00605 | PputUW4_04597 | Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. | Hypothetical protein. | 0.687 |
AFY17858.1 | AFY17868.1 | PputUW4_00651 | PputUW4_00661 | ATPase central domain-containing protein; [O] COG0464 ATPases of the AAA+ class. | [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | 0.540 |
AFY17858.1 | AFY17876.1 | PputUW4_00651 | PputUW4_00669 | ATPase central domain-containing protein; [O] COG0464 ATPases of the AAA+ class. | Hypothetical protein. | 0.401 |
AFY17858.1 | AFY19414.1 | PputUW4_00651 | PputUW4_02215 | ATPase central domain-containing protein; [O] COG0464 ATPases of the AAA+ class. | [BQ] COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein. | 0.671 |
AFY17858.1 | htpG | PputUW4_00651 | PputUW4_03790 | ATPase central domain-containing protein; [O] COG0464 ATPases of the AAA+ class. | Heat shock protein 90; Molecular chaperone. Has ATPase activity. | 0.810 |
AFY17868.1 | AFY17813.1 | PputUW4_00661 | PputUW4_00605 | [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. | 0.825 |
AFY17868.1 | AFY17858.1 | PputUW4_00661 | PputUW4_00651 | [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | ATPase central domain-containing protein; [O] COG0464 ATPases of the AAA+ class. | 0.540 |
AFY17868.1 | AFY17876.1 | PputUW4_00661 | PputUW4_00669 | [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | Hypothetical protein. | 0.941 |
AFY17868.1 | AFY19414.1 | PputUW4_00661 | PputUW4_02215 | [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | [BQ] COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein. | 0.768 |
AFY17868.1 | AFY21722.1 | PputUW4_00661 | PputUW4_04530 | [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | [E] COG1231 Monoamine oxidase. | 0.451 |
AFY17868.1 | AFY21789.1 | PputUW4_00661 | PputUW4_04597 | [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | Hypothetical protein. | 0.788 |
AFY17868.1 | AFY22276.1 | PputUW4_00661 | PputUW4_05086 | [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | [E] COG1231 Monoamine oxidase. | 0.451 |
AFY17868.1 | htpG | PputUW4_00661 | PputUW4_03790 | [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | Heat shock protein 90; Molecular chaperone. Has ATPase activity. | 0.613 |
AFY17868.1 | iaaM | PputUW4_00661 | PputUW4_04962 | [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | Tryptophan 2-monooxygenase; [E] COG1231 Monoamine oxidase. | 0.451 |
AFY17876.1 | AFY17813.1 | PputUW4_00669 | PputUW4_00605 | Hypothetical protein. | Hypothetical protein; [QR] COG0500 SAM-dependent methyltransferases. | 0.599 |
AFY17876.1 | AFY17858.1 | PputUW4_00669 | PputUW4_00651 | Hypothetical protein. | ATPase central domain-containing protein; [O] COG0464 ATPases of the AAA+ class. | 0.401 |
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