STRINGSTRING
AFY19418.1 AFY19418.1 nagE nagE AFY22576.1 AFY22576.1 AFY19419.1 AFY19419.1 AFY19421.1 AFY19421.1 AFY19420.1 AFY19420.1 AFY19422.1 AFY19422.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY19418.1[K] COG1737 Transcriptional regulators. (302 aa)    
Predicted Functional Partners:
nagE
PTS system, N-acetylglucosamine-specific IIBC component; [G] COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
  
 0.670
AFY22576.1
[K] COG1737 Transcriptional regulators.
  
     0.611
AFY19419.1
Histidine transport ATP-binding protein; [E] COG1126 ABC-type polar amino acid transport system, ATPase component.
       0.532
AFY19421.1
[E] COG0765 ABC-type amino acid transport system, permease component.
  
    0.487
AFY19420.1
Succinylglutamate desuccinylase/aspartoacylase; [R] COG3608 Predicted deacylase.
       0.474
AFY19422.1
[E] COG0765 ABC-type amino acid transport system, permease component.
       0.465
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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