STRINGSTRING
AFY19431.1 AFY19431.1 AFY17616.1 AFY17616.1 AFY20935.1 AFY20935.1 AFY21279.1 AFY21279.1 AFY21253.1 AFY21253.1 AFY19604.1 AFY19604.1 AFY22468.1 AFY22468.1 AFY21748.1 AFY21748.1 AFY18281.1 AFY18281.1 AFY17994.1 AFY17994.1 AFY21137.1 AFY21137.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY19431.1Outer membrane porin. (416 aa)    
Predicted Functional Partners:
AFY17616.1
LmbE-like protein.
  
     0.743
AFY20935.1
Hypothetical protein.
  
     0.708
AFY21279.1
Hypothetical protein.
  
     0.677
AFY21253.1
Hypothetical protein.
  
     0.656
AFY19604.1
Hypothetical protein.
  
     0.647
AFY22468.1
Hypothetical protein.
  
     0.641
AFY21748.1
Lipoprotein.
  
     0.639
AFY18281.1
Hypothetical protein.
  
     0.636
AFY17994.1
Anti-sigma-factor antagonist (STAS); [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
     0.630
AFY21137.1
YgfB and YecA; [R] COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA; Belongs to the UPF0149 family.
  
     0.627
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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