STRINGSTRING
AFY19534.1 AFY19534.1 AFY19533.1 AFY19533.1 potA potA AFY19535.1 AFY19535.1 AFY20234.1 AFY20234.1 AFY20345.1 AFY20345.1 potA-2 potA-2 AFY20344.1 AFY20344.1 AFY20236.1 AFY20236.1 AFY20343.1 AFY20343.1 AFY20235.1 AFY20235.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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Experiments
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Textmining
[Homology]
Score
AFY19534.1ABC transporter permease; [E] COG1177 ABC-type spermidine/putrescine transport system, permease component II. (262 aa)    
Predicted Functional Partners:
AFY19533.1
Extracellular solute-binding protein; [E] COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 0.992
potA
Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.991
AFY19535.1
ABC transporter permease; [E] COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
0.978
AFY20234.1
[E] COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 0.974
AFY20345.1
[E] COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 0.971
potA-2
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.966
AFY20344.1
[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
0.914
AFY20236.1
[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
  
 
0.912
AFY20343.1
[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
  
 
0.912
AFY20235.1
[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
0.910
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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