STRINGSTRING
cbiG cbiG cobM cobM cbiD cbiD cobJ cobJ cobL cobL cobH cobH cobI cobI cobK cobK cbtA cbtA cobB cobB cbtB cbtB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiG[H] COG2073 Cobalamin biosynthesis protein CbiG. (137 aa)    
Predicted Functional Partners:
cobM
[H] COG2875 Precorrin-4 methylase.
 
 
 0.996
cbiD
cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
 
 0.992
cobJ
[H] COG1010 Precorrin-3B methylase.
 
 
 0.991
cobL
precorrin-6YC5, 15-methyltransferase(decarboxylating); [H] COG2241 Precorrin-6B methylase 1.
 
  
 0.943
cobH
precorrin-8X methylmutase; [H] COG2082 Precorrin isomerase.
 
  
 0.892
cobI
Precorrin-2 C(20)-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A.
 
  
 0.851
cobK
[H] COG2099 Precorrin-6x reductase.
 
  
 0.840
cbtA
Cobalt transporter subunit CbtA.
 
     0.833
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
  
 0.816
cbtB
Cobalt transporter subunit CbtB.
       0.797
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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