Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY18238.1 | AFY19610.1 | PputUW4_01031 | PputUW4_02412 | [E] COG0531 Amino acid transporters. | Transporter-like membrane protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.421 |
AFY19100.1 | AFY19610.1 | PputUW4_01895 | PputUW4_02412 | EmrB/QacA subfamily drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | Transporter-like membrane protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.544 |
AFY19610.1 | AFY18238.1 | PputUW4_02412 | PputUW4_01031 | Transporter-like membrane protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. | [E] COG0531 Amino acid transporters. | 0.421 |
AFY19610.1 | AFY19100.1 | PputUW4_02412 | PputUW4_01895 | Transporter-like membrane protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. | EmrB/QacA subfamily drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.544 |
AFY19610.1 | AFY22341.1 | PputUW4_02412 | PputUW4_05151 | Transporter-like membrane protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. | Multidrug resistance transporter, Bcr/CflA family; [G] COG2814 Arabinose efflux permease. | 0.485 |
AFY19610.1 | galU | PputUW4_02412 | PputUW4_02411 | Transporter-like membrane protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. | UTP-glucose-1-phosphate uridylyltransferase; [M] COG1210 UDP-glucose pyrophosphorylase. | 0.509 |
AFY19610.1 | gor | PputUW4_02412 | PputUW4_02413 | Transporter-like membrane protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. | Glutathione reductase; Maintains high levels of reduced glutathione. | 0.528 |
AFY19610.1 | pvdD | PputUW4_02412 | PputUW4_01549 | Transporter-like membrane protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. | [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.528 |
AFY22341.1 | AFY19610.1 | PputUW4_05151 | PputUW4_02412 | Multidrug resistance transporter, Bcr/CflA family; [G] COG2814 Arabinose efflux permease. | Transporter-like membrane protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.485 |
galU | AFY19610.1 | PputUW4_02411 | PputUW4_02412 | UTP-glucose-1-phosphate uridylyltransferase; [M] COG1210 UDP-glucose pyrophosphorylase. | Transporter-like membrane protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.509 |
galU | gor | PputUW4_02411 | PputUW4_02413 | UTP-glucose-1-phosphate uridylyltransferase; [M] COG1210 UDP-glucose pyrophosphorylase. | Glutathione reductase; Maintains high levels of reduced glutathione. | 0.416 |
gor | AFY19610.1 | PputUW4_02413 | PputUW4_02412 | Glutathione reductase; Maintains high levels of reduced glutathione. | Transporter-like membrane protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.528 |
gor | galU | PputUW4_02413 | PputUW4_02411 | Glutathione reductase; Maintains high levels of reduced glutathione. | UTP-glucose-1-phosphate uridylyltransferase; [M] COG1210 UDP-glucose pyrophosphorylase. | 0.416 |
gor | pvdD | PputUW4_02413 | PputUW4_01549 | Glutathione reductase; Maintains high levels of reduced glutathione. | [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.555 |
pvdD | AFY19610.1 | PputUW4_01549 | PputUW4_02412 | [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | Transporter-like membrane protein; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.528 |
pvdD | gor | PputUW4_01549 | PputUW4_02413 | [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | Glutathione reductase; Maintains high levels of reduced glutathione. | 0.555 |