STRINGSTRING
ahpF ahpF ahpC ahpC AFY21598.1 AFY21598.1 AFY20317.1 AFY20317.1 lsfA lsfA sodB sodB trxB1 trxB1 trxB2 trxB2 katG katG katE1 katE1 cat cat
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
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[Homology]
Score
ahpF[O] COG3634 Alkyl hydroperoxide reductase, large subunit. (520 aa)    
Predicted Functional Partners:
ahpC
Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
 
  
 0.966
AFY21598.1
[O] COG0450 Peroxiredoxin.
 
  
 0.763
AFY20317.1
Peroxidase; [O] COG0450 Peroxiredoxin.
  
  
 0.680
lsfA
Peroxidase; [O] COG0450 Peroxiredoxin.
  
  
 0.680
sodB
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.556
trxB1
[O] COG0492 Thioredoxin reductase.
 
  
0.507
trxB2
[O] COG0492 Thioredoxin reductase.
 
  
0.505
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
  
  
 0.487
katE1
Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.462
cat
Catalase-like protein; [P] COG0753 Catalase; Belongs to the catalase family.
  
  
 0.462
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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