Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY19089.1 | AFY19633.1 | PputUW4_01884 | PputUW4_02436 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.584 |
AFY19089.1 | AFY21131.1 | PputUW4_01884 | PputUW4_03939 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.567 |
AFY19259.1 | AFY19633.1 | PputUW4_02056 | PputUW4_02436 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.560 |
AFY19259.1 | AFY19812.1 | PputUW4_02056 | PputUW4_02617 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.519 |
AFY19259.1 | AFY20504.1 | PputUW4_02056 | PputUW4_03309 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.529 |
AFY19259.1 | AFY21271.1 | PputUW4_02056 | PputUW4_04079 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | [T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | 0.478 |
AFY19259.1 | AFY21721.1 | PputUW4_02056 | PputUW4_04529 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.452 |
AFY19632.1 | AFY19633.1 | PputUW4_02435 | PputUW4_02436 | LysE family transporter; [E] COG1280 Putative threonine efflux protein. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.685 |
AFY19632.1 | AFY19634.1 | PputUW4_02435 | PputUW4_02437 | LysE family transporter; [E] COG1280 Putative threonine efflux protein. | Hypothetical protein. | 0.474 |
AFY19633.1 | AFY19089.1 | PputUW4_02436 | PputUW4_01884 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.584 |
AFY19633.1 | AFY19259.1 | PputUW4_02436 | PputUW4_02056 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.560 |
AFY19633.1 | AFY19632.1 | PputUW4_02436 | PputUW4_02435 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | LysE family transporter; [E] COG1280 Putative threonine efflux protein. | 0.685 |
AFY19633.1 | AFY19634.1 | PputUW4_02436 | PputUW4_02437 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | Hypothetical protein. | 0.604 |
AFY19633.1 | AFY19812.1 | PputUW4_02436 | PputUW4_02617 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.756 |
AFY19633.1 | AFY20504.1 | PputUW4_02436 | PputUW4_03309 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.729 |
AFY19633.1 | AFY21131.1 | PputUW4_02436 | PputUW4_03939 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.583 |
AFY19633.1 | AFY21271.1 | PputUW4_02436 | PputUW4_04079 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | [T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | 0.680 |
AFY19633.1 | AFY21369.1 | PputUW4_02436 | PputUW4_04177 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.613 |
AFY19633.1 | AFY21721.1 | PputUW4_02436 | PputUW4_04529 | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.589 |
AFY19634.1 | AFY19632.1 | PputUW4_02437 | PputUW4_02435 | Hypothetical protein. | LysE family transporter; [E] COG1280 Putative threonine efflux protein. | 0.474 |
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