STRINGSTRING
AFY19654.1 AFY19654.1 AFY21532.1 AFY21532.1 AFY20429.1 AFY20429.1 pvdM pvdM AFY22217.1 AFY22217.1 fumC fumC ppc ppc pckA pckA gltA gltA glcB glcB AFY19653.1 AFY19653.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AFY19654.1[C] COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. (346 aa)    
Predicted Functional Partners:
AFY21532.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.749
AFY20429.1
Bile acid:sodium symporter; [R] COG0385 Predicted Na+-dependent transporter.
  
    0.714
pvdM
Dipeptidase; [E] COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
  
    0.643
AFY22217.1
[E] COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
  
    0.643
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
    
 0.591
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
     
 0.542
pckA
Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
    
 0.537
gltA
[C] COG0372 Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.537
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
     
  0.499
AFY19653.1
Hypothetical protein.
       0.467
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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