STRINGSTRING
AFY19664.1 AFY19664.1 AFY19665.1 AFY19665.1 AFY20116.1 AFY20116.1 nuoCD nuoCD fadB fadB fadJ fadJ AFY20512.1 AFY20512.1 etfA3 etfA3 etfA2 etfA2 etfA1 etfA1 pvdD pvdD
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY19664.1[I] COG1960 Acyl-CoA dehydrogenases. (383 aa)    
Predicted Functional Partners:
AFY19665.1
[I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.869
AFY20116.1
[R] COG3173 Predicted aminoglycoside phosphotransferase.
 
 
 0.785
nuoCD
NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 0.754
fadB
Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.712
fadJ
3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.712
AFY20512.1
[I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
 0.666
etfA3
[C] COG2025 Electron transfer flavoprotein, alpha subunit.
 
 
 0.662
etfA2
[C] COG2025 Electron transfer flavoprotein, alpha subunit.
 
 0.649
etfA1
[C] COG2025 Electron transfer flavoprotein, alpha subunit.
 
 0.647
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.615
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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