STRINGSTRING
AFY19728.1 AFY19728.1 AFY19726.1 AFY19726.1 AFY19727.1 AFY19727.1 AFY18796.1 AFY18796.1 emrB emrB AFY17340.1 AFY17340.1 AFY19100.1 AFY19100.1 AFY21683.1 AFY21683.1 AFY17341.1 AFY17341.1 AFY20008.1 AFY20008.1 fusA1 fusA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY19728.1[V] COG1566 Multidrug resistance efflux pump. (320 aa)    
Predicted Functional Partners:
AFY19726.1
Fusaric acid resistance protein region; [S] COG1289 Predicted membrane protein.
 
  
 0.944
AFY19727.1
Hypothetical protein.
       0.778
AFY18796.1
EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily.
 
 
 0.682
emrB
EmrB/QacA family drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily.
 
 
 0.669
AFY17340.1
[K] COG1846 Transcriptional regulators.
 
  
 0.643
AFY19100.1
EmrB/QacA subfamily drug resistance transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily.
 
 
 0.642
AFY21683.1
RND family multidrug transporter membrane fusion protein; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.636
AFY17341.1
Fusaric acid resistance protein region; [S] COG1289 Predicted membrane protein.
 
  
 0.620
AFY20008.1
Multidrug efflux system inner membrane protein; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.603
fusA1
Fusaric acid resistance protein FusA; [MU] COG1538 Outer membrane protein.
 
 
 0.591
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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