Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY19480.1 | AFY19744.1 | PputUW4_02281 | PputUW4_02549 | Patatin-like phospholipase family protein. | Hypothetical protein. | 0.417 |
AFY19744.1 | AFY19480.1 | PputUW4_02549 | PputUW4_02281 | Hypothetical protein. | Patatin-like phospholipase family protein. | 0.417 |
AFY19744.1 | AFY19745.1 | PputUW4_02549 | PputUW4_02550 | Hypothetical protein. | Lipoprotein. | 0.498 |
AFY19744.1 | AFY20022.1 | PputUW4_02549 | PputUW4_02827 | Hypothetical protein. | TPR domain-containing protein; [R] COG0457 FOG: TPR repeat. | 0.570 |
AFY19744.1 | AFY20330.1 | PputUW4_02549 | PputUW4_03135 | Hypothetical protein. | HlyD family secretion protein; [V] COG1566 Multidrug resistance efflux pump. | 0.446 |
AFY19745.1 | AFY19744.1 | PputUW4_02550 | PputUW4_02549 | Lipoprotein. | Hypothetical protein. | 0.498 |
AFY20022.1 | AFY19744.1 | PputUW4_02827 | PputUW4_02549 | TPR domain-containing protein; [R] COG0457 FOG: TPR repeat. | Hypothetical protein. | 0.570 |
AFY20330.1 | AFY19744.1 | PputUW4_03135 | PputUW4_02549 | HlyD family secretion protein; [V] COG1566 Multidrug resistance efflux pump. | Hypothetical protein. | 0.446 |