STRINGSTRING
endA1 endA1 AFY19836.1 AFY19836.1 AFY19834.1 AFY19834.1 sdaC sdaC AFY17302.1 AFY17302.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
endA1[L] COG2356 Endonuclease I. (321 aa)    
Predicted Functional Partners:
AFY19836.1
Hypothetical protein.
       0.422
AFY19834.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.419
sdaC
Serine transporter; [E] COG0814 Amino acid permeases.
  
     0.419
AFY17302.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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