STRINGSTRING
AFY19854.1 AFY19854.1 AFY19853.1 AFY19853.1 AFY19856.1 AFY19856.1 AFY19855.1 AFY19855.1 cueA cueA AFY19210.1 AFY19210.1 AFY22452.1 AFY22452.1 polA polA AFY21940.1 AFY21940.1 cysN cysN ccoI ccoI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY19854.1Cation efflux family protein; [P] COG1230 Co/Zn/Cd efflux system component. (313 aa)    
Predicted Functional Partners:
AFY19853.1
[S] COG1937 Uncharacterized protein conserved in bacteria.
 
  
 0.929
AFY19856.1
Hypothetical protein.
       0.675
AFY19855.1
Hypothetical protein.
       0.673
cueA
Copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
  
 0.637
AFY19210.1
Cytochrome c biogenesis protein,transmembrane region; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
 
  
 0.632
AFY22452.1
Membrane protein; [P] COG0672 High-affinity Fe2+/Pb2+ permease.
     
 0.542
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.481
AFY21940.1
Cation efflux protein; [P] COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
 
 0.474
cysN
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
  
 0.435
ccoI
Copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
  
 0.420
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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