STRINGSTRING
AFY19905.1 AFY19905.1 AFY19904.1 AFY19904.1 AFY17939.1 AFY17939.1 AFY19906.1 AFY19906.1 coxB coxB AFY19083.1 AFY19083.1 cobN cobN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY19905.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
AFY19904.1
Hypothetical protein.
       0.501
AFY17939.1
[M] COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
  
    0.487
AFY19906.1
Hypothetical protein.
 
     0.471
coxB
[C] COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
 
     0.452
AFY19083.1
[C] COG3474 Cytochrome c2.
  
 
 0.420
cobN
Cobaltochelatase subunit CobN; [H] COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
  
  
 0.418
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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