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udg udg AFY20245.1 AFY20245.1 AFY19190.1 AFY19190.1 galU galU galE2 galE2 ugd ugd rfbA1 rfbA1 rfbA2 rfbA2 algA algA rfbB1 rfbB1 rfbB2 rfbB2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
udg[M] COG1004 Predicted UDP-glucose 6-dehydrogenase. (459 aa)    
Predicted Functional Partners:
AFY20245.1
NAD-dependent epimerase/dehydratase; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
 0.976
AFY19190.1
UDP-glucuronate 5 -epimerase; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 0.974
galU
UTP-glucose-1-phosphate uridylyltransferase; [M] COG1210 UDP-glucose pyrophosphorylase.
  
 0.950
galE2
NAD-dependent epimerase/dehydratase; [M] COG1087 UDP-glucose 4-epimerase.
 
 0.950
ugd
[M] COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
  
 
0.903
rfbA1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.647
rfbA2
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.647
algA
Bifunctional protein mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase; [M] COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.644
rfbB1
[M] COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.637
rfbB2
[M] COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.637
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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