STRINGSTRING
AFY19976.1 AFY19976.1 AFY20481.1 AFY20481.1 AFY19975.1 AFY19975.1 AFY20479.1 AFY20479.1 oprD2 oprD2 AFY20482.1 AFY20482.1 AFY20484.1 AFY20484.1 AFY21413.1 AFY21413.1 AFY20483.1 AFY20483.1 gspD gspD AFY19974.1 AFY19974.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY19976.1Hypothetical protein. (156 aa)    
Predicted Functional Partners:
AFY20481.1
Hypothetical protein.
  
     0.624
AFY19975.1
[F] COG2233 Xanthine/uracil permeases.
       0.587
AFY20479.1
[NU] COG2165 Type II secretory pathway, pseudopilin PulG.
  
     0.525
oprD2
Outer membrane porin.
  
     0.506
AFY20482.1
Hypothetical protein.
  
     0.500
AFY20484.1
Hypothetical protein.
  
     0.484
AFY21413.1
Lysine exporter protein LysE/YggA; [E] COG1280 Putative threonine efflux protein.
  
     0.484
AFY20483.1
Fimbrial assembly protein.
  
     0.466
gspD
Type II secretion system protein D; [U] COG4796 Type II secretory pathway, component HofQ; Belongs to the bacterial secretin family.
  
     0.461
AFY19974.1
[T] COG3448 CBS-domain-containing membrane protein.
       0.408
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.