Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17645.1 | AFY17719.1 | PputUW4_00437 | PputUW4_00511 | Hypothetical protein. | Leucine-rich repeat-containing protein. | 0.770 |
AFY17645.1 | AFY19684.1 | PputUW4_00437 | PputUW4_02487 | Hypothetical protein. | Hypothetical protein. | 0.712 |
AFY17645.1 | AFY19685.1 | PputUW4_00437 | PputUW4_02488 | Hypothetical protein. | Hypothetical protein. | 0.728 |
AFY17645.1 | AFY19738.1 | PputUW4_00437 | PputUW4_02543 | Hypothetical protein. | UvrD/REP helicase; [L] COG0210 Superfamily I DNA and RNA helicases. | 0.772 |
AFY17645.1 | AFY19992.1 | PputUW4_00437 | PputUW4_02797 | Hypothetical protein. | Outer membrane autotransporter; [M] COG3468 Type V secretory pathway, adhesin AidA. | 0.673 |
AFY17645.1 | AFY21178.1 | PputUW4_00437 | PputUW4_03986 | Hypothetical protein. | Hypothetical protein. | 0.638 |
AFY17645.1 | AFY21794.1 | PputUW4_00437 | PputUW4_04602 | Hypothetical protein. | Hypothetical protein. | 0.772 |
AFY17645.1 | AFY22260.1 | PputUW4_00437 | PputUW4_05070 | Hypothetical protein. | Hypothetical protein. | 0.484 |
AFY17645.1 | AFY22381.1 | PputUW4_00437 | PputUW4_05191 | Hypothetical protein. | S-type Pyocin. | 0.752 |
AFY17645.1 | fecA | PputUW4_00437 | PputUW4_01601 | Hypothetical protein. | [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.534 |
AFY17719.1 | AFY17645.1 | PputUW4_00511 | PputUW4_00437 | Leucine-rich repeat-containing protein. | Hypothetical protein. | 0.770 |
AFY17719.1 | AFY19684.1 | PputUW4_00511 | PputUW4_02487 | Leucine-rich repeat-containing protein. | Hypothetical protein. | 0.748 |
AFY17719.1 | AFY19685.1 | PputUW4_00511 | PputUW4_02488 | Leucine-rich repeat-containing protein. | Hypothetical protein. | 0.698 |
AFY17719.1 | AFY19738.1 | PputUW4_00511 | PputUW4_02543 | Leucine-rich repeat-containing protein. | UvrD/REP helicase; [L] COG0210 Superfamily I DNA and RNA helicases. | 0.766 |
AFY17719.1 | AFY19992.1 | PputUW4_00511 | PputUW4_02797 | Leucine-rich repeat-containing protein. | Outer membrane autotransporter; [M] COG3468 Type V secretory pathway, adhesin AidA. | 0.685 |
AFY17719.1 | AFY21178.1 | PputUW4_00511 | PputUW4_03986 | Leucine-rich repeat-containing protein. | Hypothetical protein. | 0.635 |
AFY17719.1 | AFY21794.1 | PputUW4_00511 | PputUW4_04602 | Leucine-rich repeat-containing protein. | Hypothetical protein. | 0.761 |
AFY17719.1 | AFY22260.1 | PputUW4_00511 | PputUW4_05070 | Leucine-rich repeat-containing protein. | Hypothetical protein. | 0.458 |
AFY17719.1 | AFY22381.1 | PputUW4_00511 | PputUW4_05191 | Leucine-rich repeat-containing protein. | S-type Pyocin. | 0.728 |
AFY17719.1 | fecA | PputUW4_00511 | PputUW4_01601 | Leucine-rich repeat-containing protein. | [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.417 |
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