STRINGSTRING
AFY19992.1 AFY19992.1 AFY17719.1 AFY17719.1 AFY17645.1 AFY17645.1 AFY19738.1 AFY19738.1 AFY19684.1 AFY19684.1 AFY19685.1 AFY19685.1 AFY21794.1 AFY21794.1 fecA fecA AFY22260.1 AFY22260.1 AFY22381.1 AFY22381.1 AFY21178.1 AFY21178.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY19992.1Outer membrane autotransporter; [M] COG3468 Type V secretory pathway, adhesin AidA. (865 aa)    
Predicted Functional Partners:
AFY17719.1
Leucine-rich repeat-containing protein.
  
     0.685
AFY17645.1
Hypothetical protein.
  
     0.673
AFY19738.1
UvrD/REP helicase; [L] COG0210 Superfamily I DNA and RNA helicases.
  
     0.646
AFY19684.1
Hypothetical protein.
  
     0.633
AFY19685.1
Hypothetical protein.
  
     0.633
AFY21794.1
Hypothetical protein.
  
     0.622
fecA
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.619
AFY22260.1
Hypothetical protein.
  
     0.616
AFY22381.1
S-type Pyocin.
  
   
 0.600
AFY21178.1
Hypothetical protein.
  
     0.594
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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